Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000024983 (Vti1a)
Chromosomal location
Chr 19: 55390547 - 55701051 (+)
Description
vesicle transport through interaction with t-SNAREs homolog 1A (yeast) Gene [Source:MGI Symbol;Acc:MGI:1855699]
RefSeq_dna
NM_016862 
RefSeq_peptide
NP_058558.1 
UniGene
Mm.258637 
MGI
MGI:1855699 
Uniprot/SWISSPROT
O89116 
Uniprot/SPTREMBL
Q8CBJ3 Q8CET6 Q5FWJ7 
Human Ortholog
ENSG00000151532 (VTI1A)
Omim not available
UniTrap UNI7931
Vector Insertion
Chr 19: 55396488 - 55402835
Public Clones RRM168 (baygenomics) D064D03 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 41% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI5760
Vector Insertion
Chr 19: 55402947 - 55404566
Public Clones CSI132 (baygenomics) RRU210 (baygenomics) RRG306 (baygenomics)
Private Clones not available
Severity of mutation (?) Insertion after 40% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI38046
Vector Insertion
Chr 19: 55440807 - 55455431
Public Clones (sanger)
Private Clones not available
Severity of mutation (?) Insertion after 40% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI19833
Vector Insertion
Chr 19: 55461700 - 55466273
Public Clones not available
Private Clones OST379304 (lexicon)
Severity of mutation (?) Insertion after 52% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI16284
Vector Insertion
Chr 19: 55466359 - 55573000
Public Clones (sanger) IST11937B5 (tigm) IST14874C4 (tigm) IST11534E9 (tigm) IST14950E7 (tigm)
IST14950D6 (tigm)
Private Clones OST464092 (lexicon) OST382919 (lexicon) OST56409 (lexicon) OST43516 (lexicon)
Severity of mutation (?) Insertion after 65% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI27570
Vector Insertion
Chr 19: 55573072 - 55573732
Public Clones not available
Private Clones OST56443 (lexicon)
Severity of mutation (?) Insertion after 76% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI3528
Vector Insertion
Chr 19: 55573795 - 55698306
Public Clones BB0540 (sanger) D117B11 (ggtc) (ggtc) CMHD-GT_496.1G2-3 (cmhd) CMHD-GT_251A4-3 (cmhd)
CMHD-GT_101D5-3 (cmhd) IST12244F9 (tigm) IST12738H11 (tigm) IST14897C1 (tigm)
IST11681B1 (tigm) IST14180H10 (tigm) IST10921C11 (tigm) IST12496E10 (tigm)
IST10614B8 (tigm)
Private Clones OST347717 (lexicon) OST49834 (lexicon) OST33928 (lexicon) OST33460 (lexicon)
OST31658 (lexicon) OST28624 (lexicon) OST23915 (lexicon) OST21286 (lexicon)
OST20612 (lexicon) OST17209 (lexicon) OST16143 (lexicon) OST15422 (lexicon)
OST1673 (lexicon)
Severity of mutation (?) Insertion after 86% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es