Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000027506 (Tpd52)
Chromosomal location
Chr 3: 8928626 - 9004723 (-)
Description
tumor protein D52 Gene [Source:MGI (curated);Acc:Tpd52-001]
RefSeq_dna
NM_001025261 NM_001025262 NM_001025264 NM_001025263 
RefSeq_peptide
NP_001020432.1 NP_001020433.1 NP_033438.1 NP_001020435.1 NP_001020434.1 
UniGene
Mm.407241 Mm.405554 
MGI
MGI:107749 
Uniprot/SWISSPROT
Q62393 
Uniprot/SPTREMBL
Q8K564 Q545M5 Q99KP8 Q8CCU1 
Human Ortholog
ENSG00000076554 (TPD52)
Omim not available
UniTrap UNI6021
Vector Insertion
Chr 3: 9004404 - 9004479
Public Clones TEA085 (baygenomics) XK492 (baygenomics) CSH565 (baygenomics) XC233 (baygenomics)
P067E09 (ggtc) A051A07 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI36941
Vector Insertion
Chr 3: 8993740 - 9004479
Public Clones 5SD027G10 (ggtc) (ggtc) 3SD027G10 (ggtc) 3SD027H10 (ggtc) 5SE027B07 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI30997
Vector Insertion
Chr 3: 8963846 - 8993891
Public Clones (sanger) 5SE051F09 (ggtc) 5SE224A07 (ggtc) 3SD014E12 (ggtc) 3SD072H02 (ggtc)
3SE051F09 (ggtc) 3SE224A07 (ggtc) 3SP126A06 (ggtc) 5SE086B10 (ggtc)
5SD014E12 (ggtc) 5SD072H02 (ggtc) 5SD144G09 (ggtc) IST12443H9 (tigm)
IST12443G9 (tigm) IST10725E6 (tigm) IST14885E7 (tigm) IST14773A11 (tigm)
IST11569E9 (tigm) IST14921G6 (tigm) IST14765G3 (tigm) IST14773A8 (tigm)
IST10044C6 (tigm) IST12443E12 (tigm) IST10038B8 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI20290
Vector Insertion
Chr 3: 8953683 - 8953800
Public Clones CMHD-GT_519C9-3 (cmhd)
Private Clones OST368131 (lexicon) OST69148 (lexicon) OST68679 (lexicon) OST57143 (lexicon)
OST43730 (lexicon) OST43026 (lexicon) OST41630 (lexicon) OST41629 (lexicon)
OST41401 (lexicon) OST41389 (lexicon) OST40073 (lexicon) OST38925 (lexicon)
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI32990
Vector Insertion
Chr 3: 8953683 - 8963983
Public Clones IST14551E2 (tigm) IST14595E8 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI16387
Vector Insertion
Chr 3: 8947630 - 8953683
Public Clones (sanger)
Private Clones OST461863 (lexicon)
Severity of mutation (?) Insertion after 13% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI6464
Vector Insertion
Chr 3: 8944713 - 8947480
Public Clones LRY049 (baygenomics) CMHD-GT_308E03-3 (cmhd)
Private Clones OST34135 (lexicon)
Severity of mutation (?) Insertion after 44% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI29962
Vector Insertion
Chr 3: 8934991 - 8936481
Public Clones D176B05 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 65% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI16348
Vector Insertion
Chr 3: 8929435 - 8931175
Public Clones not available
Private Clones OST462845 (lexicon) OST437418 (lexicon) OST433201 (lexicon) OST419925 (lexicon)
OST411901 (lexicon) OST360422 (lexicon) OST254181 (lexicon) OST225543 (lexicon)
OST198680 (lexicon) OST115199 (lexicon) OST53747 (lexicon) OST9928 (lexicon)
Severity of mutation (?) Insertion after 100% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI36890
Vector Insertion
Chr 3: 8928625 - 8935041
Public Clones 3SE305G11 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 76% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es