Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000035245 (A130022J15Rik)
Chromosomal location
Chr 6: 97060938 - 97098921 (-)
Description
RIKEN cDNA A130022J15 gene Gene [Source:MGI Symbol;Acc:MGI:2141669]
RefSeq_dna
NM_175313 
RefSeq_peptide
NP_780522.1 
UniGene
Mm.251789 Mm.399648 
MGI
MGI:2141669 
Uniprot/SWISSPROT
Q8BYW9 
Human Ortholog
ENSG00000163378 (C3orf64)
Omim not available
UniTrap UNI26627
Vector Insertion
Chr 6: 97095389 - 97095479
Public Clones not available
Private Clones OST106858 (lexicon)
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:
Transcript ENSMUST00000113387
Sequence
GCCGGAGGTTTCCGGTTCGCGGCTGCCGGCGGTGACGTCTCGTTACTCCCAAGCTGCCGCCACTGCCGCCGCCGCCGCTCCCTAGTCAAGCTGCAG GTC

CGTGAAAATCCAATCAAGCCACACACGAGTGGAGCGCGATTGACCGTTTTGTGCAAAAAGACGCG ATTTTCCCCACGGCCAAGGGTTACTTTTTTCCAT

GAATGGTCAAGTTTTGTTAACCGGCAGAACGCATTGCAGAGCTGTGGATTTGGATACCCGAAATTTAGGACCTAGTGCTCCAAGCCGCGACCTAGAAG G

TTTTAGGCTAGCCAAAGCATCAGCAGCTTCCGGAGGGGATTCTGAGGACTAAAAAG - UNI26627 - GTCTGCAGGTTGCTATGTTAATGCTGCTTG

TCTTTGGAGTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGACAAGGCTCATTCTGAG - UNI26627 - GCATCCACTACATCACCTGGCGGAAGC

CCAGCAAAGTATTTCCTCAGGATAAG GGTCACCATCCAACTCTGGGAGAACACCCGAAGTTTACCAACTACTCTTTTGATGTAGAAGAATTCATGTACC

TTGTCCTTCAGGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCCATTTAAGAAGAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTG

TTGACACCCTCTCACAGCCATAGACTCACAATC
Translation
    - UNI26627 - MLMLLVFGVLLHEVPLSGQDKAHSE - UNI26627 - ASTTSPGGSPAKYFLRIR RVTIQLWENTRSLPTTLLM
Transcript ENSMUST00000054344
Sequence
ACTCCCAAGCTGCCGCCACTGCCGCCGCCGCCGCTCCCTAGTCAAGCTGCAG GTCCGTGAAAATCCAATCAAGCCACACACGAGTGGAGCGCGATTGAC

CGTTTTGTGCAAAAAGACGCGGTAGCCTAACCTACTAAAGCTTTCATCCCTGCCAAGTCTTGCCAGAGAACTCAACTCCGGGAAGGCTTTCTGCCAGGCC

CTGAAGTTGTACTTTCATGCACCACAGGGAACCATCACCCAGCATATGCAAGTGGGTACATGCCCTCCCTTGCAAAAGCCAACTTTCTGATCTGCTCCTT

TAGATTTTCCCCACGGCCAAGGGTTACTTTTTTCCATGAATGGTCAAGTTTTGTTAACCGGCAGAACGCATTGCAGAGCTGTGGATTTGGATACCCGAAA

TTTAGGACCTAGTGCTCCAAGCCGCGACCTAGAAG GTTTTAGGCTAGCCAAAGCATCAGCAGCTTCCGGAGGGGATTCTGAGGACTAAAAAG - UNI2

6627 - GTCTGCAGGTTGCTATGTTAATGCTGCTTGTCTTTGGAGTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGACAAGGCTCATTCTGAGGCTG

ACGATGCGCCTGGCAAGGCCCTGTATGACTACTCCAGCCTCCGCCTCCCTGCGGAGCACATTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGT

GTGCAGGGAGGATTCCCACTGTCCATATAAG AAACACTTAGAAAATCTAAACTACTGCTGGGGTTATGAGAAGTCCTGCGCACCAGAGTTTAGATTCGG

TTCCCCCGTTTGCAGCTATGTCGACTTGGGATG GACCGATACTCTGGAGTCAGCCCAGGACATGTTCTGGAGGCAAGCTGACTTTGGATATGCGCGAGA

GCGACTGGGAGAGATAAGAACGATCTGCCAGCCAGAGAGAGCA AGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGTATTGTAGAGCTACTGGTCT

ATACCTGGACTTAAGAAACATCAAGAGAAACCACGACAG ATTCAAGGAAGATTTTCTTCAGGGTGGTGAAATTGGTGGATACTGTAAACTTGACAGTCA

TGCACTGGTGTCTGAAGGGCAGCGTAAAAGTCCCCTGCAGTCTTG GTTTGCTGAGCTACAAGGCTACACGCAGCTCAATTTCAGGCCTATAGAAGATGC

TAAATGTGACATCGTTGTTGAAAAACCAACGTATTTCATGAAATTAGATGCAG GTATTAATATGTACCACCACTTCTGTGACTTCCTGAATCTCTACCT

CACTCAGCACGTTAACAATTCTTTCAGCACGGACGTGTACATCGTGATGTGGGACACC AGCACTTACGGGTATGGTGACCTCTTCTCCGATACCTGGAA

AGCATTTACTGACTATGACGTCATACATTTGAAAACCTATGATTCCAAAAAG GTGTGTTTTAAAGAAGCCGTGTTTTCGTTGCTGCCCCGCATGCGGTA

CGGGCTGTTCTATAACACGCCTCTG ATCTCTGGCTGTCAGAATACAGGATTATTCAGAGCCTTCTCCCAGCATGTGCTGCATAGGCTGAACATCACTCA

AGAGGGACCCAAG GATGGCAAAGTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGAAAATCCTGAACCAAGACGAG CTGGTAAATGCACTGA

AAACAGTATCCACATTTGAAGTCCGGGTGGTTGATTACAAGTACAG AGAACTCGGGTTTTTAGATCAGCTCAGGATCACGCACAACACGGACATATTTA

TTGGCATGCATGGAGCTGGCCTTACCCACTTACTTTTCCTTCCGGACTGGGCTGCTGTGTTCGAGCT GTACAACTGTGAAGATGAGCGCTGCTACTTAG

ACCTGGCCAGGCTCAGAGGCATCCACTACATCACCTGGCGGAAGCCCAGCAAAGTATTTCCTCAGGATAAG GGTCACCATCCAACTCTGGGAGAACACC

CGAAGTTTACCAACTACTCTTTTGATGTAGAAGAATTCATGTACCTTGTCCTTCAGGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCCATTTAAGAA

GAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCTCTCACAGCCATAGACTCACAATCAGAGGAGCAGAACAGCCTGTCA

TATCCTACTGTAAGAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTGAACTAGTGATCCTCTTGCCTGAGCCAACTGAGTGCTCACC

TTACAGGTGTGCCCCACCATGCCTGTCTACAGAGTTACTTTTTGTATATGAAAGCACACCTCCAGGAGATGCTAAGTCTTCCATGTGTTTATTGTGTCTT

TGCTATTTATCAAAGGTATTTTTGCACTGAAAAAGGTTACTTTTATAGTTCAAAGGTGGGCAGATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATG

CAAAGTTGTCAACATCGGTGGCTTCAGACTTGATATATGTGTTTGTTAACTGTAATGTGATCTTGATTCCAGAGTGTCATGGCTTCATCTATTTGGATAA

ACTCATCTATTTGGATAAACTCAGAACTGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACATGGCTTAGTGTAGAATGCTG

GCCTTGCATGTATGGGCCTCTGGGTTTAATCCCTAGCAACACCACACACACACACACACACACACACACACACACACACACACGTCTAAGTCTGTGATTC

TCAGGACCAAACTATAGGACTACGTTATAGACCAGTAATTAGTCAACTCCAGATTCCGTGCATCAAGAGCCTGACAAAGATCATGCTGTTGTATTTATTA

ATTTTGTTTCTATATCTCATTTCAATCATGTTCTCCCCAAATGTAATGGCAGTGTTGATAAGAGCCTGTCAGAACATTCTGTAGTACCATCTCCACTGAC

GCTTCAGCCGTGAAGACCCTTCATGCTGACTTGGCATGAAGTCTTAGTTTCCATCAGGCCAGTGTTTGTGAGCACACACGGCTGTGTGTATCTACCTCTG

GCAGAATGGAAGTAACCCTAGTCTCTGTAAAACACTGCCAAGTAGCCACATGAAGAGAAGACACTTTCCCTGTTTATTTGTTTTTTGATTTTTAAAATAA

GGCCATTAAAAACACGGTAGACCTGTGAATTATCC
Translation
   - UNI26627 - MLMLLVFGVLLHEVPLSGQDKAHSEADDAPGKALYDYSSLRLPAEHIPFFLHNNRHVASVCREDSHCPYK KHLENLNYCWGYE

KSCAPEFRFGSPVCSYVDLGW WTDTLESAQDMFWRQADFGYARERLGEIRTICQPERA SDSSLVCSRYLQYCRATGLYLDLRNIKRNHDR RFKEDFL

QGGEIGGYCKLDSHALVSEGQRKSPLQSW WFAELQGYTQLNFRPIEDAKCDIVVEKPTYFMKLDAG GINMYHHFCDFLNLYLTQHVNNSFSTDVYIVM

WDT STYGYGDLFSDTWKAFTDYDVIHLKTYDSKK VCFKEAVFSLLPRMRYGLFYNTPL ISGCQNTGLFRAFSQHVLHRLNITQEGPK DGKVRVTIL

ARSTEYRKILNQDE LVNALKTVSTFEVRVVDYKYR RELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFEL LYNCEDERCYLDLARLRGIHY

ITWRKPSKVFPQDK GHHPTLGEHPKFTNYSFDVEEFMYLVLQAAEHVLQHPQWPFKKKHDEL

For any suggestions or comments, please send an email to unitrap@crg.es