Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000040565 (Btaf1)
Chromosomal location
Chr 19: 37000569 - 37088547 (+)
Description
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:2147538]
RefSeq_dna
NM_001080706 
RefSeq_peptide
NP_001074175.1 
UniGene
Mm.295062 
MGI
MGI:2147538 
Uniprot/SPTREMBL
A0ZVB6 Q52KH4 Q8BTS9 
Human Ortholog
ENSG00000095564 (BTAF1)
Omim not available
UniTrap UNI7058
Vector Insertion
Chr 19: 37000892 - 37019701
Public Clones (sanger) RRZ105 (baygenomics) 5SD028C10 (ggtc) 3SD028C10 (ggtc)
IST14673B2 (tigm) IST14269B5 (tigm) IST14506F2 (tigm)
Private Clones OST429680 (lexicon) OST280886 (lexicon) OST274616 (lexicon) OST237475 (lexicon)
OST220844 (lexicon) OST205205 (lexicon) OST144854 (lexicon) OST88316 (lexicon)
OST44666 (lexicon)
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI4800
Vector Insertion
Chr 19: 37019826 - 37023557
Public Clones AS0062 (sanger)
Private Clones OST261287 (lexicon) OST107121 (lexicon) OST39662 (lexicon)
Severity of mutation (?) Insertion after 3% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI22974
Vector Insertion
Chr 19: 37023673 - 37025523
Public Clones not available
Private Clones OST279798 (lexicon)
Severity of mutation (?) Insertion after 5% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI12327
Vector Insertion
Chr 19: 37025668 - 37030860
Public Clones A012D08 (ggtc)
Private Clones OST364273 (lexicon) OST330052 (lexicon) OST213533 (lexicon)
Severity of mutation (?) Insertion after 7% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI11394
Vector Insertion
Chr 19: 37031025 - 37032862
Public Clones M119F03 (ggtc) IST14903G4 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 10% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI4974
Vector Insertion
Chr 19: 37041078 - 37041165
Public Clones AE0762 (sanger)
Private Clones not available
Severity of mutation (?) Insertion after 20% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI2124
Vector Insertion
Chr 19: 37041343 - 37043545
Public Clones AB0175 (sanger) AA0277 (sanger) AE0822 (sanger) RRF308 (baygenomics)
Private Clones not available
Severity of mutation (?) Insertion after 23% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI7538
Vector Insertion
Chr 19: 37067075 - 37068759
Public Clones RRR171 (baygenomics) RRR170 (baygenomics)
Private Clones not available
Severity of mutation (?) Insertion after 66% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI4449
Vector Insertion
Chr 19: 37084230 - 37084501
Public Clones AC0186 (sanger)
Private Clones OST42880 (lexicon)
Severity of mutation (?) Insertion after 94% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI35247
Vector Insertion
Chr 19: 37084673 - 37085750
Public Clones IST11522C4 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 97% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es