Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000053617 (Sh3pxd2a)
Chromosomal location
Chr 19: 47341403 - 47538891 (-)
Description
SH3 and PX domains 2A Gene [Source:MGI Symbol;Acc:MGI:1298393]
RefSeq_dna
NM_008018 
RefSeq_peptide
NP_032044.2 
UniGene
Mm.475900 
MGI
MGI:1298393 
Uniprot/SWISSPROT
O89032 
Human Ortholog
ENSG00000107957 (SH3PXD2A)
Omim not available
UniTrap UNI17298
Vector Insertion
Chr 19: 47499061 - 47538553
Public Clones IST12414C5 (tigm) IST12522E12 (tigm) IST13029E1 (tigm)
Private Clones OST445753 (lexicon) OST247999 (lexicon) OST225893 (lexicon) OST54698 (lexicon)
OST54697 (lexicon)
Severity of mutation (?) Insertion after 2% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI11445
Vector Insertion
Chr 19: 47472382 - 47498979
Public Clones M120E07 (ggtc) CMHD-GT_510B1-3 (cmhd) IST14880G2 (tigm)
Private Clones OST460885 (lexicon) OST317976 (lexicon) OST66429 (lexicon)
Severity of mutation (?) Insertion after 5% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI16263
Vector Insertion
Chr 19: 47447951 - 47472305
Public Clones IST11635A6 (tigm)
Private Clones OST464398 (lexicon) OST395245 (lexicon) OST345071 (lexicon) OST280096 (lexicon)
OST239735 (lexicon) OST167661 (lexicon) OST93134 (lexicon) OST48543 (lexicon)
OST43351 (lexicon)
Severity of mutation (?) Insertion after 7% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI30768
Vector Insertion
Chr 19: 47394765 - 47417959
Public Clones (ggtc) IST14758H8 (tigm) IST14818G10 (tigm) IST14058C5 (tigm) IST12346F1 (tigm)
IST13104D1 (tigm) IST12522C1 (tigm) IST12438F10 (tigm) IST14967H3 (tigm)
IST14688E3 (tigm) IST11583A4 (tigm) IST14865E8 (tigm) IST14850B12 (tigm)
IST11800D5 (tigm) IST10788G5 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 13% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI25116
Vector Insertion
Chr 19: 47388657 - 47394765
Public Clones not available
Private Clones OST194764 (lexicon)
Severity of mutation (?) Insertion after 13% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI30339
Vector Insertion
Chr 19: 47361209 - 47388524
Public Clones CMHD-GT_403E1-3 (cmhd) IST14975D4 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 17% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI26210
Vector Insertion
Chr 19: 47357595 - 47361094
Public Clones not available
Private Clones OST130674 (lexicon)
Severity of mutation (?) Insertion after 21% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es