Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000055067 (Smyd3)
Chromosomal location
Chr 1: 180885177 - 181448172 (-)
Description
SET and MYND domain containing 3 Gene [Source:MGI (curated);Acc:Smyd3-001]
RefSeq_dna
NM_027188 
RefSeq_peptide
NP_081464.1 
UniGene
Mm.222338 
MGI
MGI:1916976 
Uniprot/SWISSPROT
Q9CWR2 
Uniprot/SPTREMBL
Q3TIF7 Q3TR55 Q8C2Y2 
Human Ortholog
ENSG00000185420 (SMYD3)
Omim not available
UniTrap UNI6865
Vector Insertion
Chr 1: 181447918 - 181448083
Public Clones BGA510 (baygenomics) P021C10 (ggtc) P026E06 (ggtc) D072D10 (ggtc)
W168D06 (ggtc)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI25835
Vector Insertion
Chr 1: 181353550 - 181447918
Public Clones (sanger) IST14864G6 (tigm)
Private Clones OST159654 (lexicon) OST65720 (lexicon) OST53842 (lexicon)
Severity of mutation (?) Insertion after 13% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI28331
Vector Insertion
Chr 1: 181341871 - 181341917
Public Clones not available
Private Clones OST33688 (lexicon)
Severity of mutation (?) Insertion after 18% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI27011
Vector Insertion
Chr 1: 181340596 - 181341160
Public Clones not available
Private Clones OST78974 (lexicon) OST59013 (lexicon) OST53681 (lexicon)
Severity of mutation (?) Insertion after 26% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI27112
Vector Insertion
Chr 1: 181335551 - 181340537
Public Clones not available
Private Clones OST69724 (lexicon)
Severity of mutation (?) Insertion after 31% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI2484
Vector Insertion
Chr 1: 181325963 - 181335413
Public Clones XT0569 (sanger) AS0527 (sanger)
Private Clones not available
Severity of mutation (?) Insertion after 41% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI30693
Vector Insertion
Chr 1: 181024465 - 181325963
Public Clones (sanger) IST12300H5 (tigm) IST11736B1BBF1 (tigm) IST14923E4 (tigm)
IST11084C6 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 41% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI7574
Vector Insertion
Chr 1: 181016566 - 181022996
Public Clones RRR349 (baygenomics)
Private Clones not available
Severity of mutation (?) Insertion after 55% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI27742
Vector Insertion
Chr 1: 180902428 - 180973867
Public Clones not available
Private Clones OST50926 (lexicon)
Severity of mutation (?) Insertion after 84% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI7263
Vector Insertion
Chr 1: 180887694 - 180902318
Public Clones RRT230 (baygenomics)
Private Clones not available
Severity of mutation (?) Insertion after 92% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es