Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000059552 (Trp53)
Chromosomal location
Chr 11: 69393861 - 69405375 (+)
Description
transformation related protein 53 Gene [Source:MGI (curated);Acc:Trp53-001]
RefSeq_dna
NM_011640 
RefSeq_peptide
NP_035770.2 NP_001120705.1 
UniGene
Mm.474963 
MGI
MGI:98834 
Uniprot/SWISSPROT
P02340 
Uniprot/SPTREMBL
A5JTV6 A6YM30 O70366 Q3UGQ1 Q549C9 Q64451 Q6TDG9 Q8C526 Q91XH8 Q925E2 Q9ER40 Q9JLE1 Q80ZA1 Q9JLE0 
Human Ortholog
ENSG00000141510 (TP53)
Omim 133239 - ESOPHAGEAL CANCER  151623 - LI-FRAUMENI SYNDROME 1  161550 - NASOPHARYNGEAL CARCINOMA  202300 - ADRENOCORTICAL CARCINOMA, HEREDITARY  211980 - LUNG CANCER  260500 - PAPILLOMA OF CHOROID PLEXUS  275355 - SQUAMOUS CELL CARCINOMA, HEAD AND NECK  
UniTrap UNI7978
Vector Insertion
Chr 11: 69394018 - 69400392
Public Clones RRI298 (baygenomics) RRI347 (baygenomics) RST226 (baygenomics) D020C05 (ggtc)
P117D07 (ggtc) H010E04 (ggtc) D043E09 (ggtc) P012E04 (ggtc) P102F10 (ggtc)
D003D06 (ggtc) D042E01 (ggtc) M120D04 (ggtc) H001F10 (ggtc) D047C05 (ggtc)
F009E05 (ggtc) P097C07 (ggtc) P032H01 (ggtc) D043C05 (ggtc) P026F07 (ggtc)
P151C02 (ggtc) D002E08 (ggtc) D015A05 (ggtc) FHCRC-GT-S6-7A1 (fhcrc) PST173-2 (escells)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI15230
Vector Insertion
Chr 11: 69394018 - 69400392
Public Clones (sanger) H010E04 (ggtc) D145C03 (ggtc) D033H05 (ggtc) D002E08 (ggtc)
P117D07 (ggtc) E079G02 (ggtc) D047C05 (ggtc) D028F09 (ggtc) P097C07 (ggtc)
D155F02 (ggtc) D042E01 (ggtc) D026E08 (ggtc) P140H09 (ggtc) D105G08 (ggtc)
D028F12 (ggtc) D002D08 (ggtc) E047B10 (ggtc) D043E09 (ggtc) 5SE314D03 (ggtc)
D003D06 (ggtc) E113H06 (ggtc) P115A04 (ggtc) E027A08 (ggtc) 3SE314D03 (ggtc)
PST3571-NL (escells) IST14876B11 (tigm) IST15002E7 (tigm) IST14429C3 (tigm)
IST14609B5 (tigm) IST14522A2 (tigm) IST10210B11 (tigm) IST14428A8 (tigm)
IST14368D6 (tigm) IST14296D2 (tigm) IST13676B11 (tigm) IST14480H2 (tigm)
IST10933H5 (tigm) IST14703E10 (tigm) IST14958H2 (tigm) IST13065B3 (tigm)
IST10077A9 (tigm) IST10653G10 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI11000
Vector Insertion
Chr 11: 69400392 - 69400476
Public Clones P143C02 (ggtc)
Private Clones OST469229 (lexicon) OST464816 (lexicon) OST434728 (lexicon) OST428289 (lexicon)
OST250499 (lexicon) OST194703 (lexicon) OST59106 (lexicon) OST45353 (lexicon)
OST44623 (lexicon)
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI25985
Vector Insertion
Chr 11: 69400476 - 69400758
Public Clones P143C02 (ggtc)
Private Clones OST148201 (lexicon)
Severity of mutation (?) Insertion after 7% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI4259
Vector Insertion
Chr 11: 69400781 - 69400873
Public Clones AJ0329 (sanger)
Private Clones OST383686 (lexicon) OST298169 (lexicon) OST288192 (lexicon) OST284748 (lexicon)
OST98302 (lexicon)
Severity of mutation (?) Insertion after 9% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI21370
Vector Insertion
Chr 11: 69402753 - 69403074
Public Clones not available
Private Clones OST332855 (lexicon)
Severity of mutation (?) Insertion after 66% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI16351
Vector Insertion
Chr 11: 69404811 - 69404851
Public Clones not available
Private Clones OST462790 (lexicon)
Severity of mutation (?) Insertion after 93% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:

For any suggestions or comments, please send an email to unitrap@crg.es