Tools for the biologist enabling optimized use of gene trap clones

  Homepage | Blast Search | GO Search | Advanced Search | About

Gene ENSMUSG00000079834 (Tmlhe)
Chromosomal location
Chr NT_165789: 159647 - 334143 (+)
Description
trimethyllysine hydroxylase, epsilon Gene [Source:MGI Symbol;Acc:MGI:2180203]
RefSeq_peptide
NP_620097.1 
UniGene
Mm.394228 
MGI
MGI:2180203 
Uniprot/SWISSPROT
Q91ZE0 
Uniprot/SPTREMBL
Q3TSX6 Q3UMX1 Q99K27 
Human Ortholog
ENSG00000185973 (TMLHE)
Omim not available
UniTrap UNI31091
Vector Insertion
Chr NT_165789: 159774 - 216735
Public Clones (sanger) IST13291A11 (tigm) IST14031F6 (tigm) IST14828F2 (tigm) IST10099A11 (tigm)
IST13583E7 (tigm) IST12527G10 (tigm) IST14529D4 (tigm) IST14388F8 (tigm)
IST13806H4 (tigm) IST11934B11 (tigm) IST13720E11 (tigm) IST14173G5 (tigm)
IST11095G7 (tigm) IST14588C1 (tigm) IST10985B8 (tigm) IST11192D9 (tigm)
IST14568A7 (tigm) IST14487E3 (tigm) IST13119H10 (tigm) IST14515A9 (tigm)
IST12400B12 (tigm) IST13539E7 (tigm) IST14174A6 (tigm) IST14252G3 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 0% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI33005
Vector Insertion
Chr NT_165789: 258424 - 272713
Public Clones IST13879H11 (tigm) IST14976G1 (tigm) IST10605F5 (tigm) IST11182E6 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 28% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI34056
Vector Insertion
Chr NT_165789: 285516 - 326113
Public Clones IST13914F10 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 60% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

UniTrap UNI31077
Vector Insertion
Chr NT_165789: 326351 - 332449
Public Clones IST11074G1 (tigm) IST13932D7 (tigm) IST14464F11 (tigm) IST10609D10 (tigm)
IST10417D8 (tigm) IST14446A3 (tigm) IST11054C2 (tigm) IST10314A10 (tigm)
IST13621H1 (tigm) IST12291D6 (tigm) IST13934E4 (tigm) IST14330D9 (tigm)
IST10453B11 (tigm) IST10555B5 (tigm) IST14657C11 (tigm) IST14790H12 (tigm)
IST10405A5 (tigm) IST14159B10 (tigm) IST10901F5 (tigm) IST10286D5 (tigm)
IST12058G2 (tigm) IST10119D5 (tigm) IST14413B2 (tigm) IST11552A9 (tigm)
IST12295G3 (tigm) IST10885G7 (tigm) IST13920F4 (tigm) IST11986D4 (tigm)
IST10382C11 (tigm) IST11418A11 (tigm) IST14248C1 (tigm) IST14850B4 (tigm)
IST13862C7 (tigm) IST12098E2 (tigm) IST15095B10 (tigm) IST11589B6 (tigm)
IST11038A7 (tigm) IST12875D3 (tigm) IST10851G5 (tigm) IST14843A4 (tigm)
IST11646A8 (tigm) IST10217A9 (tigm) IST10618F11 (tigm) IST10139G9 (tigm)
IST10817C8 (tigm) IST13810B3 (tigm) IST10844D2 (tigm) IST13967E8 (tigm)
Private Clones not available
Severity of mutation (?) Insertion after 79% of polypeptide chain
Proposed experimental design for vector insertion validation (?)

Show all transcripts and translations:
Transcript ENSMUST00000115964
Sequence
GGAGCGAGAGTCAGACTGCTGTGGGAGGCTGGGTAGTAAAACGCAAAAGGACTGACAAAGCGGCACTACAGCCCCTCTTTGCTTGCATTTACCTCCTCAA

ACTTCTGAGTCGCGACTTCCAGCGCAG - UNI31091 - GATGTGGTACCATAAGTTGTTGCACCAACAAAGCAGGCTCCGTAATTTGATGAAGAGAG

GAAACATAGCTCAAGGTCTTCATCTGTCCAACTTTAAAAGTTTATTTTCATCATCCATCCATTGGTGCCATACAACTTCCAAGTCTGTGAACTGTACTTG

GCACCAACATGAAGATCATTTGG AACTGCAATATGCTGGCACTGTGATGCGCTTTGATTATGTCTGGCTTCGAGACCATTGCCGCTCAGCATCATGCTA

TAATTCTAAGACTCACCAGCGGAGCCTGGACACTGCCAGTGTGGATTTATGTATTAAGCCAAAGACAGTTCATCTGGATGAAACTATGCTCTTTTTCACT

T - UNI33005 - GGCCAGATGGTCATGTGACTAGATATGATCTGGATTGGCTGGTGAAAAACAGTTATGAAGGGCAGAAACAAAAGGTTATCCAACC

TAGAATATTATGGAATTCTAAACTCTACCAGCAAGCCCAAGTTCCATCTGTTGATTTCCAGTGCTTTTTAGAAACAAATGAAGGGTTGAAGAAGTTTCTG

CAGAACTTTTTGCTGTATGGAATTGCATTTGTAGAAAATGTCCCTCCCACTGAAGAGCATACAGAAAAATTGGCAGAAAGGATTAGCTTAATCAG AGAA

ACCATCTATGGAAGGATGTGGTATTTCACTTCAGATTTTTCCAGAGGTGACACTGCATACACCAAGCTAGCTCTAGACCGGCATACTGACACTACCTACT

TTCAAGAGCCCTGTGG - UNI34055 - CATTCAAGTATTTCATTGTCTTAAGCATGAAGGAACAGGTGGTAGAACACTGTTAGTGGATGGATTCTAT

GCAGCACAACAAGTACTTCAAAAAGCACCTGAGGAATTTGAACTCCTCAGCAAAGTACCATTGAAGCATGAATATATTGAAAATGTTGGACAATGTCACA

ATCACATGATTGGGGTTGGGCCCATCTTAAATATTTACCCATGGAATAAAGAGCTGTATTTGATCAG - UNI31077 - GTACAACAACTATGACAGG

GCTGTCATCAACACTGTGCCTTATGATGTTGTCCATCGTTGGTATACAGCACACCGAACCCTAACAACTGAATTGAGAAGGCCTGAGAATGAGCTTTGGG

TCAAATTGAAGCCTGGAAAG GTACTATTTATAGACAACTGGCGAGTACTTCATGGCAGGGAATCATTCACTGGCTACCGTCAACTCTGTGGCTGCTATT

TAACTAGAGATGATGTATTGAATACTGCTCGTCTCCTGGGTCTTCATGCATAAAATCGAAAGTGCTAGGATTATGAAAACACTTGGCATCCTCCTACCAG

AATTTTATATCAACAGAATAATATTGTGTTAAAATTTGGTTAATGTTGTCTATTTTCCCATTCTACAAAACAAAGTTTTTCCTTACTTTTCTAGGAGAAG

CCTGTTAAAGAAAGAGGGCTTCTGAGTAGTCTAATATCAGCCATCTAGTAGGTTAGATTTCTCCCCAAGTTATAACATAAGTCTAATCTTTTCCTAATCT

TTTTTATATAATTATAATTACTGTACTTAAGAAATATAATCTCAGCCCGGCAGTGGTGGTGCACGCCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGC

AGATTTCTGAATTCAAGGCCAGCCTGGTCTACAAACTGAATTCCAGGACAGCCAGGGATACACAGAGAAACCTTGTCTCAAAAAACCAAATATATATATA

TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCTCCATATTAAAAGGAAACCAATGGTATTACATAATTTGTCTTTAGCTTATCAG

AATACAAGACATTCTAGAAATGACAAAATACTGATCTGATAAAGCAACATTTGTAAAAAGTTTTTACCTTTTATAATTCATTTGACTAAGAATATATGCT

TACTTATATTTTGAATATATCCTATAATATCTTCTAGCACCTTCCAGTTTCAGAGGTTGATGGGATATTGTTTTTCTTTTTGATGAATGAATTCCATTGT

GCTACTATGGATATATATATATATATATATATATATATATATATATATATATATATACATACTATGGATT
Translation
 - UNI31091 - MWYHKLLHQQSRLRNLMKRGNIAQGLHLSNFKSLFSSSIHWCHTTSKSVNCTWHQHEDHLE ELQYAGTVMRFDYVWLRDHCRSAS

CYNSKTHQRSLDTASVDLCIKPKTVHLDETMLFFTW - UNI33005 - WPDGHVTRYDLDWLVKNSYEGQKQKVIQPRILWNSKLYQQAQVPSVDFQC

FLETNEGLKKFLQNFLLYGIAFVENVPPTEEHTEKLAERISLIR RETIYGRMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCG - UNI34055 - 

GIQVFHCLKHEGTGGRTLLVDGFYAAQQVLQKAPEEFELLSKVPLKHEYIENVGQCHNHMIGVGPILNIYPWNKELYLIR - UNI31077 - RYNNYD

RAVINTVPYDVVHRWYTAHRTLTTELRRPENELWVKLKPGK VLFIDNWRVLHGRESFTGYRQLCGCYLTRDDVLNTARLLGLHA

For any suggestions or comments, please send an email to unitrap@crg.es