|
Exon ID |
Exon location |
Forward Primer |
Primer location |
Tm |
%GC |
upstream |
ENSMUSE00000293416 |
Chr13:100845460..100845576 |
TTGCAGGTTTAGCACCCAGT |
Chr13:100845501..100845520 |
60.69 |
50 |
upstream |
ENSMUSE00000293410 |
Chr13:100844342..100844500 |
CATGCCACTAGCAAGGGAGT |
Chr13:100844466..100844485 |
60.28 |
55 |
upstream |
ENSMUSE00000293404 |
Chr13:100840032..100840191 |
GCAGTTGGGAAGAAATCAGC |
Chr13:100840096..100840115 |
59.82 |
50 |
upstream |
ENSMUSE00000293396 |
Chr13:100837420..100837511 |
GGTGCCAAAACTGTGTCTGA |
Chr13:100837420..100837439 |
59.73 |
50 |
upstream |
ENSMUSE00000293390 |
Chr13:100835832..100836021 |
TGAGGAGTCGAATGCAAAGA |
Chr13:100835937..100835956 |
59.52 |
45 |
upstream |
ENSMUSE00000293381 |
Chr13:100834314..100834444 |
TCAGCCCCAGGTTCTTAGTG |
Chr13:100834324..100834343 |
60.25 |
55 |
upstream |
ENSMUSE00000569404 |
Chr13:100830249..100831461 |
TGTTGCTCCAAGAGAACGTG |
Chr13:100830338..100830357 |
60.03 |
50 |
upstream |
ENSMUSE00000611201 |
Chr13:100829444..100829625 |
CCAGCCACTTAGGTCATGTG |
Chr13:100829536..100829555 |
59.16 |
55 |
upstream |
ENSMUSE00000611200 |
Chr13:100828681..100828900 |
CAAGAACAGCAGCCACTTCA |
Chr13:100828868..100828887 |
60.17 |
50 |
upstream |
ENSMUSE00000611199 |
Chr13:100826114..100826295 |
CTTCACCGCCAAATTCAAGT |
Chr13:100826176..100826195 |
60.11 |
45 |
upstream |
ENSMUSE00000611198 |
Chr13:100825051..100825258 |
GTGAGGGGTCGACTTCAGAG |
Chr13:100825175..100825194 |
59.83 |
60 |
upstream |
ENSMUSE00000611197 |
Chr13:100822928..100823073 |
TGTCAGAGTGCCAAGTGAGTG |
Chr13:100823001..100823021 |
60.08 |
52.38 |
upstream |
ENSMUSE00000611196 |
Chr13:100821303..100821510 |
CTGATAAGAAGGCGGTTCCA |
Chr13:100821454..100821473 |
60.21 |
50 |
upstream |
ENSMUSE00000611195 |
Chr13:100820900..100821084 |
GGGATGAGACTGCGAAAGAG |
Chr13:100820950..100820969 |
59.95 |
55 |
upstream |
ENSMUSE00000611194 |
Chr13:100819591..100819984 |
CCTATCATCTTGCCCCAGAA |
Chr13:100819678..100819697 |
60.03 |
50 |
upstream |
ENSMUSE00000611193 |
Chr13:100816681..100816794 |
AAAGCTGTGTATCCGCCATC |
Chr13:100816685..100816704 |
60.1 |
50 |
upstream |
ENSMUSE00000611192 |
Chr13:100814227..100814263 |
No primer for this exon |
upstream |
ENSMUSE00000611191 |
Chr13:100813714..100813806 |
GGAAGCCGCCATAACTTTAC |
Chr13:100813768..100813787 |
58.72 |
50 |
upstream |
ENSMUSE00000680074 |
Chr13:100812380..100812386 |
No primer for this exon |
upstream |
ENSMUSE00000293575 |
Chr13:100812015..100812240 |
TATCCGGAGGTTTGTTCACC |
Chr13:100812129..100812148 |
59.79 |
50 |
upstream |
ENSMUSE00000293567 |
Chr13:100811377..100811537 |
TCATCAGGAAGTTGCCAGTTT |
Chr13:100811415..100811435 |
59.73 |
42.86 |
upstream |
ENSMUSE00000293557 |
Chr13:100808077..100808227 |
AAGAGGAGCAGTCGCAGTGT |
Chr13:100808130..100808149 |
60.21 |
55 |
upstream |
ENSMUSE00000680073 |
Chr13:100808077..100808233 |
AAGAGGAGCAGTCGCAGTGT |
Chr13:100808130..100808149 |
60.21 |
55 |
upstream |
ENSMUSE00000293546 |
Chr13:100807715..100807892 |
AGACACTCGATTCGGGTCAG |
Chr13:100807796..100807815 |
60.26 |
55 |
*** Putative Vector Insertion (Chr 13: 100805795 - 100807714) ***
|
|
Exon ID |
Exon location |
Reverse Primer |
Primer location |
Tm |
%GC |
downstream |
ENSMUSE00000293536 |
Chr13:100805734..100805794 |
TTGAGGACCGGTGTTTTCTT |
Chr13:100805722..100805741 |
59.57 |
45 |
downstream |
ENSMUSE00000293527 |
Chr13:100805039..100805225 |
GCAGAGAGCTCGGCATTAAC |
Chr13:100805072..100805091 |
60.12 |
55 |
downstream |
ENSMUSE00000293516 |
Chr13:100800740..100800944 |
GTGAGGACTTTTTGGCAGGA |
Chr13:100800756..100800775 |
60.23 |
50 |
downstream |
ENSMUSE00000293508 |
Chr13:100797390..100797426 |
No primer for this exon |
downstream |
ENSMUSE00000371885 |
Chr13:100795352..100795610 |
TTGTCCCATGCAAGACTCTG |
Chr13:100795569..100795588 |
59.83 |
50 |
downstream |
ENSMUSE00000293491 |
Chr13:100793555..100793810 |
AAATTTCGCCGTGATACAGG |
Chr13:100793660..100793679 |
59.96 |
45 |
downstream |
ENSMUSE00000359807 |
Chr13:100787952..100790365 |
TCACCTCTTCCTCAGGTGCT |
Chr13:100790271..100790290 |
59.99 |
55 |